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glycoTraitR - Compute and analyze the glycan structrual traits from GPSM data
GlycoTraitR is an R package for analyzing glycoproteomics data, particularly glycopeptide-spectrum matches (GPSMs). It supports results generated by the pGlyco3 and Glyco-Decipher search engines. The package parses glycan structures, computes monosaccharide compositions and structural traits, and performs differential analysis of glycan heterogeneity. It constructs trait-by-PSM matrices stored in a SummarizedExperiment object, supports user-defined structural motifs, and provides visualization utilities for interpreting glycan trait changes.
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proteomicsmassspectrometryvisualizationsoftware
4.54 score 2 scripts 183 downloadsdpcc - Dynamic Programming for Convex Clustering
Use dynamic programming method to solve l1 convex clustering with identical weights.
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cpp
2.70 score 1 stars 1 scripts 164 downloads